Billing & finance

QuickBooks & Shopify

Look up invoices, bills, expenses and customers, and answer profit and cash-flow questions from your books.

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What you can do with QuickBooks

These are examples - your agent can use any of the tools you allow.

  • Reconcile Shopify Sales With QuickBooks

    Compare Shopify orders and sales totals against QuickBooks accounting records to identify missing transactions and unexplained differences.

  • Match Shopify Refunds Against Accounting

    Verify that Shopify refunds correspond to appropriate QuickBooks refund receipts, credit memos, and related accounting entries.

  • Calculate Shopify Product-Level Profitability

    Combine Shopify sales data with QuickBooks costs and expenses to estimate product contribution and identify margin improvement opportunities.

  • Create QuickBooks Invoices From Shopify Orders

    Prepare accounting invoices for eligible Shopify orders while preventing duplicate records and incorrect customer balances.

Browse all use cases and example prompts
  • Reconcile Shopify Sales With QuickBooks

    Compare Shopify orders and sales totals against QuickBooks accounting records to identify missing transactions and unexplained differences.

    Example prompt: Reconcile my Shopify sales with my QuickBooks accounting records for the selected reporting period. Use Shopify orders, refunds, discounts, taxes, shipping charges, and payment information alongside available QuickBooks invoices, sales receipts, payments, and transaction reports. Match transactions using order references, invoice numbers, amounts, dates, and other available identifiers. Identify matched records, possible missing records, duplicate-looking entries, and amount differences. Account for timing differences and distinguish gross sales from recognized accounting revenue. Produce a reconciliation table with supporting evidence and recommended next steps. Do not create or modify accounting records until I approve the exact proposed changes.

  • Match Shopify Refunds Against Accounting

    Verify that Shopify refunds correspond to appropriate QuickBooks refund receipts, credit memos, and related accounting entries.

    Example prompt: Review refunds from my Shopify store for the selected period and compare them with relevant QuickBooks refund receipts, credit memos, payments, and transaction records. Match records using order references, refund amounts, dates, and customer details where available. Identify Shopify refunds with no clear accounting match, accounting refund records that may not correspond to Shopify refunds, and amount discrepancies. Distinguish actual refund transactions from canceled orders or payment reversals. Prepare a report with the Shopify order ID, refund amount, matching QuickBooks record, and recommended action. Do not create refunds, credit memos, or journal entries without my approval.

  • Calculate Shopify Product-Level Profitability

    Combine Shopify sales data with QuickBooks costs and expenses to estimate product contribution and identify margin improvement opportunities.

    Example prompt: Analyze the profitability of products sold through my Shopify store using Shopify order line items, quantities, discounts, refunds, and available QuickBooks item sales, expense, and cost records. Calculate product-level revenue, estimated cost, contribution, and contribution margin wherever the required information is available. Separate confirmed accounting costs from estimated or missing costs. Highlight products with low contribution, frequent refunds, or unusually high discounts. Do not treat revenue as profit or allocate general expenses arbitrarily. Provide recommendations for pricing, discounts, or cost review, but do not change Shopify prices or QuickBooks records automatically.

  • Create QuickBooks Invoices From Shopify Orders

    Prepare accounting invoices for eligible Shopify orders while preventing duplicate records and incorrect customer balances.

    Example prompt: Identify Shopify orders that may need corresponding QuickBooks invoices. Review their order IDs, customer details, line items, quantities, discounts, shipping, taxes, payment status, and total amounts. Search available QuickBooks invoice and transaction records to avoid creating duplicates. Separate paid orders, unpaid orders, partially paid orders, canceled orders, and refunded orders where the available data supports those classifications. Present a proposed invoice for each eligible order and explain any accounting uncertainties. Ask for my approval before creating invoices, and report the actual QuickBooks invoice ID after successful creation. Do not assume every Shopify order should become an invoice; consider the existing bookkeeping workflow.

  • Identify Unpaid Shopify Orders And Receivables

    Compare Shopify payment status with QuickBooks customer balances to identify collections that require investigation.

    Example prompt: Review unpaid and partially paid Shopify orders and compare them with available QuickBooks customer balances, invoices, payments, and aged receivables reports. Identify which orders appear to have outstanding balances, which have corresponding accounting records, and which need further verification. Account for payment timing, partial payments, refunds, and possible differences between Shopify payment status and QuickBooks invoice status. Include Shopify order IDs, customer names, outstanding amounts, invoice references, and due dates where available. Recommend which balances should be followed up first. Do not send collection messages or record payments without approval.

  • Compare Shopify Revenue With Financial Reports

    Compare Shopify sales trends with QuickBooks Profit and Loss reports to understand accounting revenue and expense movements.

    Example prompt: Compare my Shopify sales performance with QuickBooks Profit and Loss reports for the same reporting period. Summarize Shopify gross sales, discounts, refunds, and net sales using the available store data. Compare these with QuickBooks income, expenses, and net profit. Explain differences in reporting scope, taxes, shipping, transaction timing, refunds, and accounting classifications where relevant. Show monthly comparisons when equivalent data is available and identify material differences that need reconciliation. Do not assume Shopify sales totals should exactly equal QuickBooks income, and do not modify accounting records automatically.

  • Review Shopify Expenses And Supplier Costs

    Analyze QuickBooks vendor expenses alongside Shopify sales to identify rising costs and opportunities to improve margins.

    Example prompt: Analyze my Shopify sales alongside QuickBooks vendor expenses, bills, purchases, and relevant item costs. Identify major suppliers, fulfillment expenses, packaging costs, shipping expenses, and other costs that can be connected to my store operations using the available records. Compare expenses across periods and relate them to sales trends where the data supports the comparison. Highlight rising costs, unusual transactions, and products whose margins may be affected. Distinguish directly attributable product costs from general business expenses. Recommend specific investigations or cost-saving opportunities without assuming that every vendor expense belongs to Shopify or changing any accounting records.

  • Track Shopify Payouts Against Bank Records

    Investigate differences between Shopify payment activity, recorded payouts, and QuickBooks accounting transactions.

    Example prompt: Help me reconcile Shopify payment activity and payouts with available QuickBooks payment, deposit, transfer, and transaction records. Compare payout amounts, transaction dates, fees, refunds, chargebacks, and other available adjustments. Identify records that appear matched, unmatched, duplicated, or different in amount. Distinguish order revenue from the net cash deposited after fees and adjustments. Do not claim that bank reconciliation is complete unless the necessary bank and payout data is available. Prepare a report of discrepancies and the evidence needed to resolve them. Do not create deposits, transfers, payments, or journal entries without my approval.

  • Prepare Tax And Accounting Review Reports

    Consolidate Shopify sales, refunds, taxes, and QuickBooks accounting reports for bookkeeping and professional tax review.

    Example prompt: Prepare a period-end review using Shopify order and refund data alongside available QuickBooks tax, Profit and Loss, Trial Balance, and transaction reports. Summarize sales, discounts, refunds, recorded taxes, expenses, and outstanding balances where available. Identify transactions with missing tax information, inconsistent totals, or unclear accounting treatment. Separate sales tax collected from revenue and distinguish recorded values from estimates. Provide a checklist of records to verify with my accountant. Do not assume that the integration provides a complete tax filing or compliance assessment, and do not change tax codes or accounting entries without approval.

  • Automate Shopify Bookkeeping With Approval

    Build an approval-based workflow for turning Shopify sales activity into accurate QuickBooks accounting records.

    Example prompt: Design an approval-based bookkeeping workflow for my Shopify store and QuickBooks account. Review Shopify orders, refunds, payment status, customers, products, and relevant existing QuickBooks invoices, payments, credit memos, and sales receipts. Identify which transactions need accounting records and which are already represented. Prepare proposed invoices, payments, refund receipts, deposits, or journal entries only when supported by the available information and capabilities. Check for duplicates and show the financial impact before each consequential action. Ask for explicit approval before creating or sending any records. After each approved operation, report the actual result and record identifier. Never claim that the Shopify and QuickBooks accounts are fully synchronized unless the available evidence supports that conclusion.

Works well with

What QuickBooks can do

114 tools

Showing 1-10 of 114

  • QUICKBOOKS_GET_PURCHASE_ORDER_PDFTool to download a QuickBooks purchase order as a PDF file
  • QUICKBOOKS_CAPTURE_CHARGETool to capture funds for an existing charge that was authorized but not captured
  • QUICKBOOKS_CREATE_ACCOUNTCreate a new account in QuickBooks with the given parameters
  • QUICKBOOKS_CREATE_BANK_ACCOUNTCreate a new bank account on file for a customer in QuickBooks Payments API
  • QUICKBOOKS_CREATE_BILLCreate a new bill in QuickBooks Online
  • QUICKBOOKS_CREATE_BILL_PAYMENTCreate a bill payment in QuickBooks to record payment against one or more bills
  • QUICKBOOKS_CREATE_CLASSCreate a new class in QuickBooks Online
  • QUICKBOOKS_CREATE_CREDIT_MEMOTool to create a new credit memo in QuickBooks Online
  • QUICKBOOKS_CREATE_CUSTOMERCreate a new customer in QuickBooks with the given parameters
  • QUICKBOOKS_CREATE_DEPOSITCreates a new deposit in QuickBooks Online
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Connect QuickBooks

Agiexa is preparing for public launch in November 2026. These steps describe the connection flow; join the waitlist for access updates. OpenClaw and Hermes use Agiexa plugins. Other agent connections are coming soon via MCP.

  1. 1Install Agiexa on your store
  2. 2Connect QuickBooks - one sign-in, no passwords shared
  3. 3Choose what your agent can do

Before connecting, read about agent permissions and MCP connections for Shopify.

Questions

How do I connect QuickBooks?
Sign in with QuickBooks - approve access once, no passwords stored.
What can my agent do in QuickBooks?
Anything its 114 tools allow - you describe the job, your agent picks the tools. You can turn any tool group off.
Will it act without asking me?
Your agent reads and prepares on its own. Anything that sends, spends, refunds or deletes asks for your approval first.
How do I disconnect QuickBooks?
Remove it from your Agiexa connections - takes a minute. Nothing is kept.

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